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1

A High-Resolution Enhancer Atlas of the Developing Telencephalon

Visel, Axel, Taher, Leila, Girgis, Hani, May, Dalit, Golonzhka, Olga, Hoch, Renee V., McKinsey, Gabriel L., Pattabiraman, Kartik, Silberberg, Shanni N., Blow, Matthew J., Hansen, David V., Nord, Alex

Journal:

Year:

2013

Language:

english

File:

PDF, 4.02 MB

english, 2013

2

A Comprehensive Genetic Characterization of Bacterial Motility

Girgis, Hany S., Liu, Yirchung, Ryu, William S., Tavazoie, Saeed

Journal:

Year:

2007

Language:

english

File:

PDF, 1.19 MB

english, 2007

3

[ACM Press Companion to the 20th annual ACM SIGPLAN conference - San Diego, CA, USA (2005.10.16-2005.10.20)] Companion to the 20th annual ACM SIGPLAN conference on Object-oriented programming, systems, languages, and applications - OOPSLA '05 - Visualizing errors in object oriented programs

Girgis, Hani Z., Jayaraman, Bharat, Gestwicki, Paul V.

Year:

2005

Language:

english

File:

PDF, 321 KB

english, 2005

4

MICU1 encodes a mitochondrial EF hand protein required for Ca2+ uptake

Perocchi, Fabiana, Gohil, Vishal M., Girgis, Hany S., Bao, X. Robert, McCombs, Janet E., Palmer, Amy E., Mootha, Vamsi K.

Journal:

Year:

2010

Language:

english

File:

PDF, 1.06 MB

english, 2010

5

Integrative genomics identifies MCU as an essential component of the mitochondrial calcium uniporter

Baughman, Joshua M., Perocchi, Fabiana, Girgis, Hany S., Plovanich, Molly, Belcher-Timme, Casey A., Sancak, Yasemin, Bao, X. Robert, Strittmatter, Laura, Goldberger, Olga, Bogorad, Roman L.

Journal:

Year:

2011

Language:

english

File:

PDF, 678 KB

english, 2011

6

Microcomputer Implemented PWM Inverter Using a Unique Pattern of Switching Angles

Mishriky, Aida H., Girgis, Girgis A, Selim, Hany

Journal:

IEEE Transactions on Industry Applications

Year:

1987

Language:

english

File:

PDF, 6.51 MB

english, 1987

7

Automated Linear System Parameter Identification Using Successive Differentiation and its Application in Microprocessor Controlled C and Tan δ Measurement

Selim, Hany, Girgis, Girgis A.

Journal:

IEEE Transactions on Industrial Electronics

Year:

1984

Language:

english

File:

PDF, 1.99 MB

english, 1984

8

Microprocessor-Based Digital Accelerometer and its Application in an Instrument for Motor Torque-Speed Characteristic Display During the Transient Interval

Selim, Hany, Girgis, G. A.

Journal:

IEEE Transactions on Industrial Electronics

Year:

1986

Language:

english

File:

PDF, 3.39 MB

english, 1986

9

Predicting tissue specific cis-regulatory modules in the human genome using pairs of co-occurring motifs

Hani Z Girgis, Ivan Ovcharenko

Journal:

BMC Bioinformatics

Year:

2012

Language:

english

File:

PDF, 475 KB

english, 2012

10

W1174 Computer Automated Severity Assessment of Crohn's Disease (CD) Lesions in Wireless Capsule Endoscopy (CE) Images

Girgis, Hani Z., Dassopoulos, Themistocles, Mullin, Gerard E., Kumar, Rajesh, Hager, Gregory

Journal:

Gastroenterology

Year:

2010

Language:

english

File:

PDF, 92 KB

english, 2010

11

Red: an intelligent, rapid, accurate tool for detecting repeats de-novo on the genomic scale

Girgis, Hani Z.

Journal:

BMC Bioinformatics

Year:

2015

Language:

english

File:

PDF, 670 KB

english, 2015

12

A survey and evaluations of histogram-based statistics in alignment-free sequence comparison

Luczak, Brian B, James, Benjamin T, Girgis, Hani Z

Journal:

Briefings in Bioinformatics

Year:

2017

Language:

english

File:

PDF, 1.34 MB

english, 2017

13

MeShClust: an intelligent tool for clustering DNA sequences

James, Benjamin T, Luczak, Brian B, Girgis, Hani Z

Journal:

Nucleic Acids Research

Year:

2018

Language:

english

File:

PDF, 783 KB

english, 2018

14

Genetic Architecture of Intrinsic Antibiotic Susceptibility

Girgis, Hany S., Hottes, Alison K., Tavazoie, Saeed, Herman, Christophe

Journal:

Year:

2009

Language:

english

File:

PDF, 1010 KB

english, 2009

15

MICU2, a Paralog of MICU1, Resides within the Mitochondrial Uniporter Complex to Regulate Calcium Handling

Plovanich, Molly, Bogorad, Roman L., Sancak, Yasemin, Kamer, Kimberli J., Strittmatter, Laura, Li, Andrew A., Girgis, Hany S., Kuchimanchi, Satya, De Groot, Jack, Speciner, Lauren, Taneja, Nathan, OSh

Journal:

Year:

2013

Language:

english

File:

PDF, 1.02 MB

english, 2013

16

HebbPlot: an intelligent tool for learning and visualizing chromatin mark signatures

Girgis, Hani Z., Velasco, Alfredo, Reyes, Zachary E.

Journal:

BMC Bioinformatics

Year:

2018

Language:

english

File:

PDF, 4.67 MB

english, 2018

17

Optimized arylomycins are a new class of Gram-negative antibiotics

Smith, Peter A., Koehler, Michael F. T., Girgis, Hany S., Yan, Donghong, Chen, Yongsheng, Chen, Yuan, Crawford, James J., Durk, Matthew R., Higuchi, Robert I., Kang, Jing, Murray, Jeremy, Paraselli, P

Journal:

Year:

2018

Language:

english

File:

PDF, 5.16 MB

english, 2018

18

Cardiac Phase Detection in Echocardiograms with Densely Gated Recurrent Neural Networks and Global Extrema Loss

Dezaki, Fatemeh Taheri, Liao, Zhibin, Luong, Christina, Girgis, Hany, Dhungel, Neeraj, Abdi, Amir H., Behnami, Delaram, Gin, Ken, Rohling, Robert, Abolmaesumi, Purang, Tsang, Teresa

Journal:

IEEE Transactions on Medical Imaging

Year:

2018

Language:

english

File:

PDF, 732 KB

english, 2018

19

Automatic biplane left ventricular ejection fraction estimation with mobile point-of-care ultrasound using multi-task learning and adversarial training

Jafari, Mohammad H., Girgis, Hany, Van Woudenberg, Nathan, Liao, Zhibin, Rohling, Robert, Gin, Ken, Abolmaesumi, Purang, Tsang, Terasa

Journal:

International Journal of Computer Assisted Radiology and Surgery

Year:

2019

File:

PDF, 1.51 MB

2019

20

Automatic biplane left ventricular ejection fraction estimation with mobile point-of-care ultrasound using multi-task learning and adversarial training

Jafari, Mohammad H., Girgis, Hany, Van Woudenberg, Nathan, Liao, Zhibin, Rohling, Robert, Gin, Ken, Abolmaesumi, Purang, Tsang, Terasa

Journal:

International Journal of Computer Assisted Radiology and Surgery

Year:

2019

Language:

english

File:

PDF, 1.51 MB

english, 2019

21

LtrDetector: A tool-suite for detecting long terminal repeat retrotransposons de-novo

Valencia, Joseph D., Girgis, Hani Z.

Journal:

Year:

2019

Language:

english

File:

PDF, 974 KB

english, 2019

22

Look4TRs: A de-novo tool for detecting simple tandem repeats using self-supervised hidden Markov models

Velasco, Alfredo, James, Benjamin T, Wells, Vincent D, Girgis, Hani Z, Elofsson, Arne

Journal:

Year:

2019

Language:

english

File:

PDF, 341 KB

english, 2019

23

[IEEE 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI) - Venice, Italy (2019.4.8-2019.4.11)] 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019) - Semi-Supervised Learning For Cardiac Left Ventricle Segmentation Using Conditional Deep Generative Models as Prior

Jafari, Mohammad H., Girgis, Hany, Abdi, Amir H., Liao, Zhibin, Pesteie, Mehran, Rohling, Robert, Gin, Ken, Tsang, Terasa, Abolmaesumi, Purang

Year:

2019

Language:

english

File:

PDF, 1.27 MB

english, 2019

24

Rupture of a Coronary Artery Aneurysm and Fistula to the Pulmonary Artery

Yeung, Darwin F., Kiamanesh, Omid, Girgis, Hany, Hong, Jonathan, Turaga, Mansi, Gin, Kenneth, Wong, Graham C., Janusz, Michael, Tsang, Michael Y.C., Tsang, Teresa S.M., Nair, Parvathy, Jue, John

Journal:

Circulation Cardiovascular Imaging

Year:

2019

Language:

english

File:

PDF, 343 KB

english, 2019

25

Automatic cine-based detection of patients at high risk of heart failure with reduced ejection fraction in echocardiograms

Behnami, Delaram, Luong, Christina, Vaseli, Hooman, Girgis, Hany, Abdi, Amir, Hawley, Dale, Gin, Ken, Rohling, Robert, Abolmaesumi, Purang, Tsang, Teresa

Journal:

Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization

Year:

2019

Language:

english

File:

PDF, 1.43 MB

english, 2019

26

Automatic cine-based detection of patients at high risk of heart failure with reduced ejection fraction in echocardiograms

Behnami, Delaram, Luong, Christina, Vaseli, Hooman, Girgis, Hany, Abdi, Amir, Hawley, Dale, Gin, Ken, Rohling, Robert, Abolmaesumi, Purang, Tsang, Teresa

Journal:

Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization

Year:

2019

File:

PDF, 1.43 MB

2019

27

On Modelling Label Uncertainty in Deep Neural Networks: Automatic Estimation of Intra-observer Variability in 2D Echocardiography Quality Assessment

Liao, Zhibin, Girgis, Hany, Abdi, Amir, Vaseli, Hooman, Hetherington, Jorden, Rohling, Robert, Gin, Ken, Tsang, Teresa, Abolmaesumi, Purang

Journal:

IEEE Transactions on Medical Imaging

Year:

2019

File:

PDF, 2.08 MB

2019

28

The Role of Curettage in the Care of Persistent Exit-Site Infection in Capd Patients

Ahmed, Ziauddin, Choudhury, Devasmita, Lee, Jean, Girgis, Hany

Journal:

Peritoneal Dialysis International

Year:

1997

Language:

english

File:

PDF, 38 KB

english, 1997

29

Cardiac point-of-care to cart-based ultrasound translation using constrained CycleGAN

Jafari, Mohammad H., Girgis, Hany, Van Woudenberg, Nathan, Moulson, Nathaniel, Luong, Christina, Fung, Andrea, Balthazaar, Shane, Jue, John, Tsang, Micheal, Nair, Parvathy, Gin, Ken, Rohling, Robert,

Journal:

International Journal of Computer Assisted Radiology and Surgery

Year:

2020

File:

PDF, 1.71 MB

2020

30

Impact of the updated diastolic function guidelines in the real world

Yeung, Darwin F., Jiang, River, Behrami, Delaram, Jue, John, Sharma, Rajat, Turaga, Mansi, Luong, Christina L., Tsang, Michael Y.C., Gin, Kenneth G., Girgis, Hany, Lee, Pui-Kee, Nair, Parvathy, Abolma

Journal:

International Journal of Cardiology

Year:

2020

File:

PDF, 1.06 MB

2020

31

Automated estimation of echocardiogram image quality in hospitalized patients

Luong, Christina, Liao, Zhibin, Abdi, Amir, Girgis, Hany, Rohling, Robert, Gin, Kenneth, Jue, John, Yeung, Darwin, Szefer, Elena, Thompson, Darby, Tsang, Michael Yin-Cheung, Lee, Pui Kee, Nair, Parvat

Journal:

The International Journal of Cardiovascular Imaging

Year:

2020

File:

PDF, 1.06 MB

2020

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